Availability of Faculty & Project for Hosting Research Internship Program
Please note: Acceptance to any research unit at OIST is at the discretion of the faculty. For each application round only a limited number of interns will be admitted. Not all available faculty will be able to accept an intern. Projects listed below are subject to change. OIST Faculty will assign work to research interns as appropriate, in discussion with each intern.
Oct 2021-Mar 2022
Faculty Research Interests and Project Information
Click here for more information on Research Activities at OIST.
|Mahesh Bandi||Nonlinear and Non-equilibrium Physics Unit||No availablity through Sept 2021||TBD|
|Thomas Busch||Quantum Systems||2 positions maximum||TBD||Projects of theoretical nature in the area of ultra cold atoms, quantum information and quantum engineering. Students should have a background in physics and during their time with us will get an overview of the current state of the area, and do analytical or numerical work on a project related to a currently ongoing research project, depending on their interest.|
|Thomas Bourguignon||Evolutionary Genomics||1 position maximum||TBD||
The topic of the project will be determined according to the research interest of the intern. Examples of research projects are: comparative genomics of termites, coevolution between termites and the intracellular parasites Wolbachia and Cardinium, coevolution between termites and their gut prokaryotes.
|Pinaki Chakraborty||Fluid Mechanics (Unit Video)||1 position maximum||TBD||Projects in turbulent flows in many applications.|
|Keshav Dani||Femtosecond Spectroscopy||2 positions maximum||TBD||Projects available in two-dimensional materials and energy materials using techniques in van der Waals heterostructure fabrication, ultrafast spectroscopy and photoemission spectroscopy. Students with a prior background in these fields would be competitive.|
|Erik De Schutter||Computational Neuroscience||1 position maximum||TBD||Computational neuroscience, particularly modeling of cerebellar neurons and circuits and of hippocampal synapses. Also software development.|
|Kenji Doya||Neural Computation (Unit Video)||1 position maximum from Oct 2020||TBD||
Projects in computational neuroscience and brain-inspired artificial intelligence.
|Evan Economo||Biodiversity and Biocomplexity (Unit Video)||2 positions maximum||No positions||Projects are related to evolution, ecology, biodiversity: population genetics, morphological evolution, biogeography, 3D imaging and modeling, community ecology of ants.|
|Dmitry Feichtner-Kozlov||Applied Topology Unit||TBD||TBD|
|Yejun Feng||Electronic and Quantum Magnetism||2 positions maximum||TBD||Optical projects including Raman and reflectivity types. Projects on high temperature sample growth and characterizations.|
|Eliot Fried||Mathematics, Mechanics and Materials||2 positions maximum||TBD||
Theory, simulation, and simple experiments focused on physical and biological processes with interesting geometrical or topological features, including the formation of holes during the growth of the "Swiss cheese plant" (genus monstera), the water driven erosion of stone, the formation of ridges and cracks on the bark of growing trees, and the healing of punctured soap films.
|Tom Froese||Embodied Cognitive Science Unit||2 positions maximum||TBD||
|Tomoki Fukai||Neural Coding and Brain Computing Unit||2 positions maximum||TBD||
|Izumi Fukunaga||Sensory and Behavioral Neuroscience||No positions in 2020||TBD|
|Gustavo Gioia||Continuum Physics||1 position maximum||TBD||Projects in solid mechanics in many applications|
|Igor Goryanin||Biological Systems||2 positions maximum||TBD||See unit website for details.|
|Shinobu Hikami||Mathematical and Theoretical Physics||1 position maximum||TBD|
|Philipp Höhn||Qubits and Spacetime Unit||TBD||TBD|
|Filip Husnik||Evolution, Cell Biology, and Symbiosis Unit||2 positions maximum||TBD||
Projects related to genomics and evolutionary cell biology of diverse symbioses (in deep sea protists, insects, corals, etc.) are available depending on interests of the intern.
|Hiroki Ishikawa||Immune Signalling||No positions in 2020||TBD|
|Ryota Kabe||Organic Optoelectronics Unit||1 position maximum from Oct 2020||TBD||
Development of organic glow-in-the-dark systems including organic synthesis and optical measurements.
|Julia Khusnutdinova||Coordination Chemistry and Catalysis||2 positions maximum||TBD||Stimuli-responsive polymers containing dynamic transition metal complexes; Homogeneous hydrogenation and dehydrogenation using earth-abundant metals (Fe, Mn); dynamic metal complexes and small molecule activation, as well as many other projects related to the use of transition metal complexes in catalysis, bond activation and stimuli-responsive polymers. The work involves organic and organometallic synthesis. Check more details at https://groups.oist.jp/cccu/research.|
|Tomomi Kiyomitsu||Cell Division Dynamics Unit||No positions||TBD|
|Keiko Kono||Membranology Unit||1 position maximum||TBD||See unit website for details.|
|Denis Konstantinov||Quantum Dynamics||2 positions maximum||TBD||
|Akihiro Kusumi||Membrane Cooperativity||1 position maximum||TBD||See unit website for details.|
|Bernd Kuhn||Optical Neuroimaging||1 position maximum||TBD||
Project involves training in animal surgery, in vivo two-photon imaging, and/or data analysis dependent on the interest and background of the applicant. Applicants who might want to join the OIST Graduate Program in the field of Neuroscience are specifically encouraged to apply.
|Marine Eco-Evo-Devo Unit||TBD||TBD|
|Paola Laurino||Protein Engineering and Evolution||2 positions maximum||TBD||
Different projects on enzymes evolution and design, e.g. protein engineering for biocatalysis or reconstruction of ancient folds. Requires some experience in organic chemistry or molecular biology or biochemistry.
|Nicholas Luscombe||Genomics and Regulatory Systems Unit||2 positions maximum||TBD||See unit website for details.|
|Ichiro Maruyama||Information Processing Biology (Unit Video)||No positions||1 position maximum||Projects in associative learning and memory in the nematode C. elegans.|
|Ichiro Masai||Developmental Neurobiology||2 positions maximum||TBD||Eye development in the zebrafish as a model system of neural development.|
|Sasha Mikheyev||Ecology and Evolution||2 positions maximum||TBD||See unit website for details|
|Jonathan Miller||Physics and Biology||2 positions maximum||TBD|
|Satoshi Mitarai||Marine Biophysics||2 positions maximum||TBD||
The Marine Biophysics Unit seeks research interns in Ocean Modeling, starting January 2021. The successful candidate will contribute to the development of regional ocean circulation models in the past, present, and under predicted future climatic conditions. Desirable qualifications include bachelor’s degrees in Fluid Mechanics, Physical Oceanography or a related field, and programing skills in FORTRAN and MATLAB.
|Gene Myers||Algorithms for Eco And Evo Genomics Unit||TBD||TBD|
|Akimitsu Narita||Organic and Carbon Nanomaterials Unit||TBD||TBD|
|Yasha Neiman||Quantum Gravity||1 position maximum||TBD||See unit website for details of the group’s research.|
|Síle Nic Chormaic||Light-Matter Interactions For Quantum Technologies||2 positions maximum||TBD||Experimental work (with some simulations) in cold atoms, Rydberg atoms, laser cooling, atomic spectroscopy, optical nanofibre mode propagation, optical trapping of submicron particles, nonlinear optics in whispering gallery resonators. The work is usually mainly experimental and preference given to students who can commit to longer internships (more than 3 months).|
|Yoshinori Okada||Quantum Materials Science||2 positions maximum||TBD||
Projects are available in exotic magnetic 2D materials growth and characterizations.
For details see unit website.Longer-stay is preferred.
|Svante Pääbo||Human Evolutionary Genomics Unit||TBD||TBD|
|Simone Pigolotti||Biological Complexity||2 positions maximum||TBD||Our main research activity is in theoretical and computational modeling of biophysical systems, ranging from stochastic molecular kinetics to population dynamics. Projects in non-equilibrium statistical physics and stochastic thermodynamics are also available. Candidates with background in these areas and interested in medium to long stays (i.e. more than three months) will be given preference.|
|Yabing Qi||Energy Materials and Surface Sciences||2 positions maximum||TBD||
|Timothy Ravasi||Marine Climate Change Unit||1 position maximum||TBD||Effect of Climate Change on Coral Reef fish communities.|
|Sam Reiter||Computational Neuroethology Unit||1 position maximum||1 position maximum||
|Daniel Rokhsar||Molecular Genetics Unit||TBD||TBD|
|Marco Edoardo Rosti||Complex Fluids and Flows Unit||2 positions maximum||TBD||Numerical simulations of laminar and turbulent complex flows.|
|Nori Satoh||Marine Genomics||No positions in 2020||TBD|
|Hidetoshi Saze||Plant Epigenetics||2 positions maximum||TBD||
Projects in epigenome analysis of plant genomes.
|Nic Shannon||Theory of Quantum Matter||2 positions maximum||TBD||
Theoretical projects exploring different aspects of quantum materials, condensed matter and statistical physics. Projects may be analytic or numerical in nature, and will be tailored to individual students, depending on their previous experience.
|Amy Shen||Micro/Bio/Nanofluidics (Unit Video)||2 positions maximum||TBD||Projects in the general area of microfluidics and rheology (instabilities, mixing, separations), with many biotechnology applications. See unit website for details of ongoing research.|
|Tsumoru Shintake||Quantum Wave Microscopy||1 position maximum||TBD|
|Ulf Skoglund||Structural Cellular Biology||1 position maximum||TBD|
|Daniel Spector||Nonlinear Analysis Unit||No availablity through Aug 2021||TBD||
Projects in Foundations of Analysis, in Partial Differential Equations and Modeling, in Foundations of Harmonic Analysis, as well as others based on ability and interest.
|Liron Speyer||Representation Theory and Algebraic Combinatorics Unit||
No positions in 2020
|Greg Stephens||Biological Physics Theory||2 positions maximum||TBD||See https://groups.oist.jp/bptu for an overview of our current interests and publications. Available projects include social behavior in zebrafish, the collective colony dynamics of honeybees and theoretical work in information theory and dynamical systems, especially new operator approaches.|
|Hiroki Takahashi||Experimental Quantum Information Physics||
2 positions maximum
|Tomoyuki Takahashi||Cellular and Molecular Synaptic Function||2 positions maximum||TBD||
|Fujie Tanaka||Chemistry and Chemical Bioengineering||1 position maximum||TBD||
Projects in synthetic organic chemistry related to the development of chemical transformation methods, the development of organocatalysts, and the synthesis of functionalized molecules.
|Kazumasa Tanaka||Memory Research Unit||No positions||No positions||The Memory Research Unit aims to understand how memories are stored and used in the mammalian brain. Towards this goal, we combine genetic interventions, including optogenetic manipulation of neuronal activity, and electrophysiology/calcium imaging in freely moving mice. Successful applicants will learn one or more of these approaches and conduct a small research project. See unit website for details.|
|Jun Tani||Cognitive Neurorobotics||1 position maximum||TBD||Projects related to cognitive neurorobotics. Longer periods preferred.|
|Marco Terenzio||Molecular Neuroscience Unit||TBD||TBD|
|Emile Touber||Shocks, Solitons and Turbulence Unit||1 position maximum||TBD|
|2 positions maximum||TBD|
|Gail Tripp||Human Developmental Neurobiology||1 position maximum||TBD|
|Jason Twamley||Quantum Machines Unit||TBD||TBD|
|Marylka Yoe Uusisaari||Neuronal Rhythms in Movement||1 position maximum||TBD||Projects involving either animal kinematic analysis or viral-based neuronal tracing.|
|Hiroshi Watanabe||Evolutionary Neurobiology Unit||
1 position maximum
|Jeff Wickens||Neurobiology Research||2 positions maximum||TBD||
|Matthias Wolf||Molecular Cryo-Electron Microscopy||1 position maximum||TBD|
|Tadashi Yamamoto||Cell Signalling||1 position maximum||TBD||Projects in regulation of gene expression at the mRNA level, signaling in neuronal cells and cancer cells, and regulation of obesity using mouse models.|
|Mitsuhiro Yanagida||G0 Cell Unit||1 position maximum||TBD|
|Yoko Yazaki-Sugiyama||Neuronal Mechanisms for the Critical Period||1 position maximum||TBD|
|Yohei Yokobayashi||Nucleic Acid Chemistry and Engineering||2 positions maximum||TBD||
Experimental projects on functional nucleic acids (e.g. design riboswitches to control gene expression in living cells and in cell-free systems, high-throughput analysis of ribozymes). Requires some experience in molecular biology or biochemistry experiments. Some projects may require basic programming skills (e.g. Python) to analyze large sequencing datasets.
|Ye Zhang||Bioinspired Soft Matter||No||No||Tuning nano- or micro-structures through molecular manipulation.
Design and synthesis of active matter.
|Xiaodan Zhou||Analysis on Metric Spaces Unit||No positions||1 position maximum||
Projects related to analysis and partial differential equations on Heisenberg group, sub-Riemannian manifolds and general metric measure spaces.